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Cluster: HRGMv2_3833_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3833_9 HRGMv2_3833_9_34 46332 48014 + 3.A.1.120.6
TC HRGMv2_3833_9 HRGMv2_3833_9_35 48066 49004 + 2.A.7.3.66
pfam HRGMv2_3833_9 HRGMv2_3833_9_36 49081 49986 - Acyl_CoA_thio | 4HBT_3 | 4HBT_3C
CAZyme HRGMv2_3833_9 HRGMv2_3833_9_37 50123 52249 + GH77
TC HRGMv2_3833_9 HRGMv2_3833_9_38 52318 52554 + 4.A.1.1.5
TC HRGMv2_3833_9 HRGMv2_3833_9_39 52551 53000 + 4.A.1.1.14
peptidase HRGMv2_3833_9 HRGMv2_3833_9_40 53095 55647 - M01.012
TC HRGMv2_3833_9 HRGMv2_3833_9_41 55954 57495 + 3.D.2.1.1
TC HRGMv2_3833_9 HRGMv2_3833_9_42 57501 58913 + 3.D.2.1.1
Gene ID: HRGMv2_3833_9_34
Type: TC
Location: 46332 - 48014 (+)
Gene ID: HRGMv2_3833_9_35
Type: TC
Location: 48066 - 49004 (+)
Gene ID: HRGMv2_3833_9_36
Type: pfam
Location: 49081 - 49986 (-)
Gene ID: HRGMv2_3833_9_37
Type: CAZyme
Location: 50123 - 52249 (+)
Gene ID: HRGMv2_3833_9_38
Type: TC
Location: 52318 - 52554 (+)
Gene ID: HRGMv2_3833_9_39
Type: TC
Location: 52551 - 53000 (+)
Gene ID: HRGMv2_3833_9_40
Type: peptidase
Location: 53095 - 55647 (-)
Gene ID: HRGMv2_3833_9_41
Type: TC
Location: 55954 - 57495 (+)
Gene ID: HRGMv2_3833_9_42
Type: TC
Location: 57501 - 58913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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