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Cluster: HRGMv2_3833_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3833_4 HRGMv2_3833_4_86 88387 89145 + CE4
pfam HRGMv2_3833_4 HRGMv2_3833_4_87 89432 89668 - Abhydrolase_3 | BD-FAE | BD-FAE
pfam HRGMv2_3833_4 HRGMv2_3833_4_88 89896 90411 + HTH_21
TC HRGMv2_3833_4 HRGMv2_3833_4_89 90660 92432 + 3.A.1.21.2
TC HRGMv2_3833_4 HRGMv2_3833_4_90 92429 94177 + 3.A.1.21.1
TC HRGMv2_3833_4 HRGMv2_3833_4_91 94214 94810 + 3.A.1.31.2
pfam HRGMv2_3833_4 HRGMv2_3833_4_92 94803 95489 + CbiQ
TC HRGMv2_3833_4 HRGMv2_3833_4_93 95486 96898 + 3.A.1.31.1
TC HRGMv2_3833_4 HRGMv2_3833_4_94 96939 97874 + 2.A.4.1.1
pfam HRGMv2_3833_4 HRGMv2_3833_4_95 98329 99021 + dUTPase | DCD_N | DCD_C | DCD
pfam HRGMv2_3833_4 HRGMv2_3833_4_96 99030 99350 + DUF4235
TC HRGMv2_3833_4 HRGMv2_3833_4_97 99411 100631 + 3.A.1.19.3
TC HRGMv2_3833_4 HRGMv2_3833_4_98 100684 102348 + 3.A.1.19.3
TC HRGMv2_3833_4 HRGMv2_3833_4_99 102348 103007 + 3.A.1.19.3
Gene ID: HRGMv2_3833_4_86
Type: CAZyme
Location: 88387 - 89145 (+)
Gene ID: HRGMv2_3833_4_87
Type: pfam
Location: 89432 - 89668 (-)
Gene ID: HRGMv2_3833_4_88
Type: pfam
Location: 89896 - 90411 (+)
Gene ID: HRGMv2_3833_4_89
Type: TC
Location: 90660 - 92432 (+)
Gene ID: HRGMv2_3833_4_90
Type: TC
Location: 92429 - 94177 (+)
Gene ID: HRGMv2_3833_4_91
Type: TC
Location: 94214 - 94810 (+)
Gene ID: HRGMv2_3833_4_92
Type: pfam
Location: 94803 - 95489 (+)
Gene ID: HRGMv2_3833_4_93
Type: TC
Location: 95486 - 96898 (+)
Gene ID: HRGMv2_3833_4_94
Type: TC
Location: 96939 - 97874 (+)
Gene ID: HRGMv2_3833_4_95
Type: pfam
Location: 98329 - 99021 (+)
Gene ID: HRGMv2_3833_4_96
Type: pfam
Location: 99030 - 99350 (+)
Gene ID: HRGMv2_3833_4_97
Type: TC
Location: 99411 - 100631 (+)
Gene ID: HRGMv2_3833_4_98
Type: TC
Location: 100684 - 102348 (+)
Gene ID: HRGMv2_3833_4_99
Type: TC
Location: 102348 - 103007 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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