Cluster: HRGMv2_3832_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3832
- CGC Family ID: CGCFAM_01702
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3832_57 | HRGMv2_3832_57_3 | 843 | 1583 | - | GT2 |
| pfam | HRGMv2_3832_57 | HRGMv2_3832_57_4 | 1774 | 2877 | - | Amidohydro_3 |
| pfam | HRGMv2_3832_57 | HRGMv2_3832_57_5 | 2906 | 5731 | - | DEAD | Helicase_C | ResIII | DSHCT | DEXQc_Suv3 |
| TC | HRGMv2_3832_57 | HRGMv2_3832_57_6 | 5790 | 6686 | - | 2.A.64.2.2 |
Gene ID: HRGMv2_3832_57_3
Type: CAZyme
Location: 843 - 1583 (-)
Type: CAZyme
Location: 843 - 1583 (-)
Gene ID: HRGMv2_3832_57_4
Type: pfam
Location: 1774 - 2877 (-)
Type: pfam
Location: 1774 - 2877 (-)
Gene ID: HRGMv2_3832_57_5
Type: pfam
Location: 2906 - 5731 (-)
Type: pfam
Location: 2906 - 5731 (-)
Gene ID: HRGMv2_3832_57_6
Type: TC
Location: 5790 - 6686 (-)
Type: TC
Location: 5790 - 6686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Kocuria
Species
Kocuria sp030453435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.