Cluster: HRGMv2_3813_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3813
- CGC Family ID: CGCFAM_03837
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3813_153 | HRGMv2_3813_153_2 | 1286 | 2314 | + | 1.A.35.3.2 |
| TF | HRGMv2_3813_153 | HRGMv2_3813_153_3 | 2473 | 3063 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_3813_153 | HRGMv2_3813_153_4 | 3082 | 3753 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3813_153 | HRGMv2_3813_153_5 | 4013 | 5410 | - | AA4 |
| CAZyme | HRGMv2_3813_153 | HRGMv2_3813_153_6 | 5495 | 6895 | - | AA4 |
Gene ID: HRGMv2_3813_153_2
Type: TC
Location: 1286 - 2314 (+)
Type: TC
Location: 1286 - 2314 (+)
Gene ID: HRGMv2_3813_153_3
Type: TF
Location: 2473 - 3063 (-)
Type: TF
Location: 2473 - 3063 (-)
Gene ID: HRGMv2_3813_153_4
Type:
Location: 3082 - 3753 (-)
Type:
Location: 3082 - 3753 (-)
Gene ID: HRGMv2_3813_153_5
Type: CAZyme
Location: 4013 - 5410 (-)
Type: CAZyme
Location: 4013 - 5410 (-)
Gene ID: HRGMv2_3813_153_6
Type: CAZyme
Location: 5495 - 6895 (-)
Type: CAZyme
Location: 5495 - 6895 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.