Cluster: HRGMv2_3813_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3813
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3813_72 | HRGMv2_3813_72_8 | 8217 | 8903 | + | 3.A.1.140.1 |
| pfam | HRGMv2_3813_72 | HRGMv2_3813_72_9 | 8893 | 9780 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_3813_72 | HRGMv2_3813_72_10 | 9796 | 10929 | + | Peptidase_M23 |
| TC | HRGMv2_3813_72 | HRGMv2_3813_72_11 | 10960 | 12111 | + | 9.B.174.1.1 |
| pfam | HRGMv2_3813_72 | HRGMv2_3813_72_12 | 12208 | 13650 | + | PGI |
| TC | HRGMv2_3813_72 | HRGMv2_3813_72_13 | 13701 | 14585 | + | 3.A.11.1.4 |
| CAZyme | HRGMv2_3813_72 | HRGMv2_3813_72_14 | 14627 | 15457 | - | GT51 |
Gene ID: HRGMv2_3813_72_8
Type: TC
Location: 8217 - 8903 (+)
Type: TC
Location: 8217 - 8903 (+)
Gene ID: HRGMv2_3813_72_9
Type: pfam
Location: 8893 - 9780 (+)
Type: pfam
Location: 8893 - 9780 (+)
Gene ID: HRGMv2_3813_72_10
Type: STP
Location: 9796 - 10929 (+)
Type: STP
Location: 9796 - 10929 (+)
Gene ID: HRGMv2_3813_72_11
Type: TC
Location: 10960 - 12111 (+)
Type: TC
Location: 10960 - 12111 (+)
Gene ID: HRGMv2_3813_72_12
Type: pfam
Location: 12208 - 13650 (+)
Type: pfam
Location: 12208 - 13650 (+)
Gene ID: HRGMv2_3813_72_13
Type: TC
Location: 13701 - 14585 (+)
Type: TC
Location: 13701 - 14585 (+)
Gene ID: HRGMv2_3813_72_14
Type: CAZyme
Location: 14627 - 15457 (-)
Type: CAZyme
Location: 14627 - 15457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.