Cluster: HRGMv2_3813_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3813
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3813_42 | HRGMv2_3813_42_17 | 14962 | 15741 | - | 9.B.10.1.1 |
| pfam | HRGMv2_3813_42 | HRGMv2_3813_42_18 | 15741 | 16100 | - | PTPS |
| pfam | HRGMv2_3813_42 | HRGMv2_3813_42_19 | 16120 | 16584 | - | SpoU_methylase |
| CAZyme | HRGMv2_3813_42 | HRGMv2_3813_42_20 | 16650 | 17738 | - | GH73 |
Gene ID: HRGMv2_3813_42_17
Type: TC
Location: 14962 - 15741 (-)
Type: TC
Location: 14962 - 15741 (-)
Gene ID: HRGMv2_3813_42_18
Type: pfam
Location: 15741 - 16100 (-)
Type: pfam
Location: 15741 - 16100 (-)
Gene ID: HRGMv2_3813_42_19
Type: pfam
Location: 16120 - 16584 (-)
Type: pfam
Location: 16120 - 16584 (-)
Gene ID: HRGMv2_3813_42_20
Type: CAZyme
Location: 16650 - 17738 (-)
Type: CAZyme
Location: 16650 - 17738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.