Cluster: HRGMv2_3813_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3813
- CGC Family ID: CGCFAM_04248
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3813_41 | HRGMv2_3813_41_4 | 3107 | 3814 | + | 8.A.3.2.1 |
| TC | HRGMv2_3813_41 | HRGMv2_3813_41_5 | 3894 | 5738 | + | 9.B.18.2.1 |
| pfam | HRGMv2_3813_41 | HRGMv2_3813_41_6 | 5749 | 6264 | + | PglD_N |
| TC | HRGMv2_3813_41 | HRGMv2_3813_41_7 | 6267 | 6893 | + | 9.B.18.1.1 |
| CAZyme | HRGMv2_3813_41 | HRGMv2_3813_41_8 | 6886 | 7983 | + | GT4 |
Gene ID: HRGMv2_3813_41_4
Type: TC
Location: 3107 - 3814 (+)
Type: TC
Location: 3107 - 3814 (+)
Gene ID: HRGMv2_3813_41_5
Type: TC
Location: 3894 - 5738 (+)
Type: TC
Location: 3894 - 5738 (+)
Gene ID: HRGMv2_3813_41_6
Type: pfam
Location: 5749 - 6264 (+)
Type: pfam
Location: 5749 - 6264 (+)
Gene ID: HRGMv2_3813_41_7
Type: TC
Location: 6267 - 6893 (+)
Type: TC
Location: 6267 - 6893 (+)
Gene ID: HRGMv2_3813_41_8
Type: CAZyme
Location: 6886 - 7983 (+)
Type: CAZyme
Location: 6886 - 7983 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.