Cluster: HRGMv2_3813_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3813
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3813_157 | HRGMv2_3813_157_1 | 1 | 630 | + | 3.A.1.3.20 |
| pfam | HRGMv2_3813_157 | HRGMv2_3813_157_2 | 707 | 2272 | + | DUF4127 |
| CAZyme | HRGMv2_3813_157 | HRGMv2_3813_157_3 | 2496 | 3632 | + | GH126 |
| TC | HRGMv2_3813_157 | HRGMv2_3813_157_4 | 3622 | 4479 | + | 9.B.34.1.2 |
| CAZyme | HRGMv2_3813_157 | HRGMv2_3813_157_5 | 4507 | 5757 | + | GT2 |
Gene ID: HRGMv2_3813_157_1
Type: TC
Location: 1 - 630 (+)
Type: TC
Location: 1 - 630 (+)
Gene ID: HRGMv2_3813_157_2
Type: pfam
Location: 707 - 2272 (+)
Type: pfam
Location: 707 - 2272 (+)
Gene ID: HRGMv2_3813_157_3
Type: CAZyme
Location: 2496 - 3632 (+)
Type: CAZyme
Location: 2496 - 3632 (+)
Gene ID: HRGMv2_3813_157_4
Type: TC
Location: 3622 - 4479 (+)
Type: TC
Location: 3622 - 4479 (+)
Gene ID: HRGMv2_3813_157_5
Type: CAZyme
Location: 4507 - 5757 (+)
Type: CAZyme
Location: 4507 - 5757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.