Cluster: HRGMv2_3812_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3812
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3812_40 | HRGMv2_3812_40_6 | 4225 | 5328 | - | GT28 |
| pfam | HRGMv2_3812_40 | HRGMv2_3812_40_7 | 5346 | 6731 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_3812_40 | HRGMv2_3812_40_8 | 6732 | 7703 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3812_40_6
Type: CAZyme
Location: 4225 - 5328 (-)
Type: CAZyme
Location: 4225 - 5328 (-)
Gene ID: HRGMv2_3812_40_7
Type: pfam
Location: 5346 - 6731 (-)
Type: pfam
Location: 5346 - 6731 (-)
Gene ID: HRGMv2_3812_40_8
Type: TC
Location: 6732 - 7703 (-)
Type: TC
Location: 6732 - 7703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.