Cluster: HRGMv2_3812_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3812
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3812_38 | HRGMv2_3812_38_11 | 11318 | 12322 | + | 4.D.2.1.4 |
| pfam | HRGMv2_3812_38 | HRGMv2_3812_38_12 | 12319 | 13254 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_3812_38 | HRGMv2_3812_38_13 | 13251 | 14810 | + | GT83 |
Gene ID: HRGMv2_3812_38_11
Type: TC
Location: 11318 - 12322 (+)
Type: TC
Location: 11318 - 12322 (+)
Gene ID: HRGMv2_3812_38_12
Type: pfam
Location: 12319 - 13254 (+)
Type: pfam
Location: 12319 - 13254 (+)
Gene ID: HRGMv2_3812_38_13
Type: CAZyme
Location: 13251 - 14810 (+)
Type: CAZyme
Location: 13251 - 14810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.