Cluster: HRGMv2_3812_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3812
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3812_33 | HRGMv2_3812_33_7 | 3313 | 4329 | - | 9.B.146.1.1 |
| pfam | HRGMv2_3812_33 | HRGMv2_3812_33_8 | 4501 | 6414 | - | Sulfatase |
| NULL(UNKNOWN) | HRGMv2_3812_33 | HRGMv2_3812_33_9 | 6447 | 7055 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3812_33 | HRGMv2_3812_33_10 | 7125 | 8213 | - | GT9 |
| CAZyme | HRGMv2_3812_33 | HRGMv2_3812_33_11 | 8164 | 9210 | - | GT9 |
Gene ID: HRGMv2_3812_33_7
Type: TC
Location: 3313 - 4329 (-)
Type: TC
Location: 3313 - 4329 (-)
Gene ID: HRGMv2_3812_33_8
Type: pfam
Location: 4501 - 6414 (-)
Type: pfam
Location: 4501 - 6414 (-)
Gene ID: HRGMv2_3812_33_9
Type:
Location: 6447 - 7055 (-)
Type:
Location: 6447 - 7055 (-)
Gene ID: HRGMv2_3812_33_10
Type: CAZyme
Location: 7125 - 8213 (-)
Type: CAZyme
Location: 7125 - 8213 (-)
Gene ID: HRGMv2_3812_33_11
Type: CAZyme
Location: 8164 - 9210 (-)
Type: CAZyme
Location: 8164 - 9210 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.