Cluster: HRGMv2_3812_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3812
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3812_7 | HRGMv2_3812_7_20 | 22708 | 23847 | + | GT28 |
| pfam | HRGMv2_3812_7 | HRGMv2_3812_7_21 | 23949 | 25193 | + | DNA_processg_A | DprA_WH | LDcluster4 |
| TC | HRGMv2_3812_7 | HRGMv2_3812_7_22 | 25205 | 27340 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_3812_7_20
Type: CAZyme
Location: 22708 - 23847 (+)
Type: CAZyme
Location: 22708 - 23847 (+)
Gene ID: HRGMv2_3812_7_21
Type: pfam
Location: 23949 - 25193 (+)
Type: pfam
Location: 23949 - 25193 (+)
Gene ID: HRGMv2_3812_7_22
Type: TC
Location: 25205 - 27340 (+)
Type: TC
Location: 25205 - 27340 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.