Cluster: HRGMv2_3812_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3812
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3812_3 | HRGMv2_3812_3_10 | 7175 | 8311 | + | GT19 |
| TC | HRGMv2_3812_3 | HRGMv2_3812_3_11 | 8308 | 10050 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_3812_3 | HRGMv2_3812_3_12 | 10050 | 12578 | + | GT30 |
Gene ID: HRGMv2_3812_3_10
Type: CAZyme
Location: 7175 - 8311 (+)
Type: CAZyme
Location: 7175 - 8311 (+)
Gene ID: HRGMv2_3812_3_11
Type: TC
Location: 8308 - 10050 (+)
Type: TC
Location: 8308 - 10050 (+)
Gene ID: HRGMv2_3812_3_12
Type: CAZyme
Location: 10050 - 12578 (+)
Type: CAZyme
Location: 10050 - 12578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.