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Cluster: HRGMv2_3811_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3811_16 HRGMv2_3811_16_11 10753 11676 + 2.A.7.3.52
STP HRGMv2_3811_16 HRGMv2_3811_16_12 11772 12293 + Nitroreductase
CAZyme HRGMv2_3811_16 HRGMv2_3811_16_13 12619 13827 - GH171
TC HRGMv2_3811_16 HRGMv2_3811_16_14 14136 15290 - 9.B.174.1.1
STP HRGMv2_3811_16 HRGMv2_3811_16_15 15309 16454 - Peptidase_M23
pfam HRGMv2_3811_16 HRGMv2_3811_16_16 16470 17381 - FtsX | FtsX_ECD
TC HRGMv2_3811_16 HRGMv2_3811_16_17 17347 18033 - 3.A.1.140.1
Gene ID: HRGMv2_3811_16_11
Type: TC
Location: 10753 - 11676 (+)
Gene ID: HRGMv2_3811_16_12
Type: STP
Location: 11772 - 12293 (+)
Gene ID: HRGMv2_3811_16_13
Type: CAZyme
Location: 12619 - 13827 (-)
Gene ID: HRGMv2_3811_16_14
Type: TC
Location: 14136 - 15290 (-)
Gene ID: HRGMv2_3811_16_15
Type: STP
Location: 15309 - 16454 (-)
Gene ID: HRGMv2_3811_16_16
Type: pfam
Location: 16470 - 17381 (-)
Gene ID: HRGMv2_3811_16_17
Type: TC
Location: 17347 - 18033 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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