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Cluster: HRGMv2_3811_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3811_15 HRGMv2_3811_15_12 10161 11411 + 2.A.16.2.2
pfam HRGMv2_3811_15 HRGMv2_3811_15_13 11728 12396 - Lactamase_B | Lactamase_B_2 | Lactamase_B_3
CAZyme HRGMv2_3811_15 HRGMv2_3811_15_14 12533 13405 + GH73
pfam HRGMv2_3811_15 HRGMv2_3811_15_15 13407 13886 + SpoU_methylase
pfam HRGMv2_3811_15 HRGMv2_3811_15_16 13883 14239 + PTPS
TC HRGMv2_3811_15 HRGMv2_3811_15_17 14239 15015 + 9.B.10.1.1
Gene ID: HRGMv2_3811_15_12
Type: TC
Location: 10161 - 11411 (+)
Gene ID: HRGMv2_3811_15_13
Type: pfam
Location: 11728 - 12396 (-)
Gene ID: HRGMv2_3811_15_14
Type: CAZyme
Location: 12533 - 13405 (+)
Gene ID: HRGMv2_3811_15_15
Type: pfam
Location: 13407 - 13886 (+)
Gene ID: HRGMv2_3811_15_16
Type: pfam
Location: 13883 - 14239 (+)
Gene ID: HRGMv2_3811_15_17
Type: TC
Location: 14239 - 15015 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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