Cluster: HRGMv2_3811_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3811
- CGC Family ID: CGCFAM_09362
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3811_4 | HRGMv2_3811_4_6 | 5190 | 6233 | + | GT9 |
| CAZyme | HRGMv2_3811_4 | HRGMv2_3811_4_7 | 6233 | 7288 | + | GT9 |
| NULL(UNKNOWN) | HRGMv2_3811_4 | HRGMv2_3811_4_8 | 7281 | 7925 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3811_4 | HRGMv2_3811_4_9 | 8024 | 9427 | + | 2.A.25.1.5 |
| TC | HRGMv2_3811_4 | HRGMv2_3811_4_10 | 9504 | 9833 | - | 2.A.78.1.1 |
| TC | HRGMv2_3811_4 | HRGMv2_3811_4_11 | 9830 | 10525 | - | 2.A.78.1.1 |
Gene ID: HRGMv2_3811_4_6
Type: CAZyme
Location: 5190 - 6233 (+)
Type: CAZyme
Location: 5190 - 6233 (+)
Gene ID: HRGMv2_3811_4_7
Type: CAZyme
Location: 6233 - 7288 (+)
Type: CAZyme
Location: 6233 - 7288 (+)
Gene ID: HRGMv2_3811_4_8
Type:
Location: 7281 - 7925 (+)
Type:
Location: 7281 - 7925 (+)
Gene ID: HRGMv2_3811_4_9
Type: TC
Location: 8024 - 9427 (+)
Type: TC
Location: 8024 - 9427 (+)
Gene ID: HRGMv2_3811_4_10
Type: TC
Location: 9504 - 9833 (-)
Type: TC
Location: 9504 - 9833 (-)
Gene ID: HRGMv2_3811_4_11
Type: TC
Location: 9830 - 10525 (-)
Type: TC
Location: 9830 - 10525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.