Cluster: HRGMv2_3811_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3811
- CGC Family ID: CGCFAM_00451
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3811_1 | HRGMv2_3811_1_35 | 44765 | 46246 | + | 2.A.80.1.1 |
| TC | HRGMv2_3811_1 | HRGMv2_3811_1_36 | 46451 | 47377 | + | 2.A.19.5.2 |
| CAZyme | HRGMv2_3811_1 | HRGMv2_3811_1_37 | 47908 | 48864 | + | GT2 |
| TC | HRGMv2_3811_1 | HRGMv2_3811_1_38 | 48953 | 49621 | + | 3.A.7.13.2 |
Gene ID: HRGMv2_3811_1_35
Type: TC
Location: 44765 - 46246 (+)
Type: TC
Location: 44765 - 46246 (+)
Gene ID: HRGMv2_3811_1_36
Type: TC
Location: 46451 - 47377 (+)
Type: TC
Location: 46451 - 47377 (+)
Gene ID: HRGMv2_3811_1_37
Type: CAZyme
Location: 47908 - 48864 (+)
Type: CAZyme
Location: 47908 - 48864 (+)
Gene ID: HRGMv2_3811_1_38
Type: TC
Location: 48953 - 49621 (+)
Type: TC
Location: 48953 - 49621 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.