Cluster: HRGMv2_3810_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3810
- CGC Family ID: CGCFAM_10460
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3810_122 | HRGMv2_3810_122_4 | 2661 | 3542 | + | 2.A.7.7.2 |
| pfam | HRGMv2_3810_122 | HRGMv2_3810_122_5 | 3711 | 4352 | + | Resolvase |
| CAZyme | HRGMv2_3810_122 | HRGMv2_3810_122_6 | 4549 | 5106 | + | GT2 |
Gene ID: HRGMv2_3810_122_4
Type: TC
Location: 2661 - 3542 (+)
Type: TC
Location: 2661 - 3542 (+)
Gene ID: HRGMv2_3810_122_5
Type: pfam
Location: 3711 - 4352 (+)
Type: pfam
Location: 3711 - 4352 (+)
Gene ID: HRGMv2_3810_122_6
Type: CAZyme
Location: 4549 - 5106 (+)
Type: CAZyme
Location: 4549 - 5106 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.