Cluster: HRGMv2_3810_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3810
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3810_50 | HRGMv2_3810_50_7 | 5506 | 6609 | - | GT28 |
| pfam | HRGMv2_3810_50 | HRGMv2_3810_50_8 | 6606 | 7979 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3810_50 | HRGMv2_3810_50_9 | 8018 | 8980 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3810_50_7
Type: CAZyme
Location: 5506 - 6609 (-)
Type: CAZyme
Location: 5506 - 6609 (-)
Gene ID: HRGMv2_3810_50_8
Type: pfam
Location: 6606 - 7979 (-)
Type: pfam
Location: 6606 - 7979 (-)
Gene ID: HRGMv2_3810_50_9
Type: TC
Location: 8018 - 8980 (-)
Type: TC
Location: 8018 - 8980 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.