Cluster: HRGMv2_3810_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3810
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3810_26 | HRGMv2_3810_26_11 | 11194 | 11970 | - | 9.B.10.1.1 |
| pfam | HRGMv2_3810_26 | HRGMv2_3810_26_12 | 11970 | 12326 | - | PTPS |
| pfam | HRGMv2_3810_26 | HRGMv2_3810_26_13 | 12323 | 12802 | - | SpoU_methylase |
| CAZyme | HRGMv2_3810_26 | HRGMv2_3810_26_14 | 12804 | 13793 | - | GH73 |
Gene ID: HRGMv2_3810_26_11
Type: TC
Location: 11194 - 11970 (-)
Type: TC
Location: 11194 - 11970 (-)
Gene ID: HRGMv2_3810_26_12
Type: pfam
Location: 11970 - 12326 (-)
Type: pfam
Location: 11970 - 12326 (-)
Gene ID: HRGMv2_3810_26_13
Type: pfam
Location: 12323 - 12802 (-)
Type: pfam
Location: 12323 - 12802 (-)
Gene ID: HRGMv2_3810_26_14
Type: CAZyme
Location: 12804 - 13793 (-)
Type: CAZyme
Location: 12804 - 13793 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.