Cluster: HRGMv2_3810_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3810
- CGC Family ID: CGCFAM_03693
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3810_7 | HRGMv2_3810_7_3 | 3329 | 4708 | - | 2.A.25.1.4 |
| TC | HRGMv2_3810_7 | HRGMv2_3810_7_4 | 4756 | 6102 | - | 2.A.25.1.4 |
| TC | HRGMv2_3810_7 | HRGMv2_3810_7_5 | 6607 | 7806 | + | 2.A.1.59.4 |
| CAZyme | HRGMv2_3810_7 | HRGMv2_3810_7_6 | 7868 | 9466 | - | GT83 |
Gene ID: HRGMv2_3810_7_3
Type: TC
Location: 3329 - 4708 (-)
Type: TC
Location: 3329 - 4708 (-)
Gene ID: HRGMv2_3810_7_4
Type: TC
Location: 4756 - 6102 (-)
Type: TC
Location: 4756 - 6102 (-)
Gene ID: HRGMv2_3810_7_5
Type: TC
Location: 6607 - 7806 (+)
Type: TC
Location: 6607 - 7806 (+)
Gene ID: HRGMv2_3810_7_6
Type: CAZyme
Location: 7868 - 9466 (-)
Type: CAZyme
Location: 7868 - 9466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.