Cluster: HRGMv2_3810_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3810
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3810_4 | HRGMv2_3810_4_13 | 9698 | 12229 | - | GT30 |
| TC | HRGMv2_3810_4 | HRGMv2_3810_4_14 | 12249 | 13982 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_3810_4 | HRGMv2_3810_4_15 | 13979 | 15115 | - | GT19 |
Gene ID: HRGMv2_3810_4_13
Type: CAZyme
Location: 9698 - 12229 (-)
Type: CAZyme
Location: 9698 - 12229 (-)
Gene ID: HRGMv2_3810_4_14
Type: TC
Location: 12249 - 13982 (-)
Type: TC
Location: 12249 - 13982 (-)
Gene ID: HRGMv2_3810_4_15
Type: CAZyme
Location: 13979 - 15115 (-)
Type: CAZyme
Location: 13979 - 15115 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.