Cluster: HRGMv2_3810_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3810
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3810_148 | HRGMv2_3810_148_2 | 86 | 811 | - | 3.A.1.3.15 |
| TC | HRGMv2_3810_148 | HRGMv2_3810_148_3 | 804 | 1460 | - | 3.A.1.3.15 |
| STP | HRGMv2_3810_148 | HRGMv2_3810_148_4 | 1476 | 2312 | - | SBP_bac_3 |
| pfam | HRGMv2_3810_148 | HRGMv2_3810_148_5 | 2396 | 3229 | - | Polysacc_deac_1 |
| CAZyme | HRGMv2_3810_148 | HRGMv2_3810_148_6 | 3229 | 4086 | - | CE4 |
Gene ID: HRGMv2_3810_148_2
Type: TC
Location: 86 - 811 (-)
Type: TC
Location: 86 - 811 (-)
Gene ID: HRGMv2_3810_148_3
Type: TC
Location: 804 - 1460 (-)
Type: TC
Location: 804 - 1460 (-)
Gene ID: HRGMv2_3810_148_4
Type: STP
Location: 1476 - 2312 (-)
Type: STP
Location: 1476 - 2312 (-)
Gene ID: HRGMv2_3810_148_5
Type: pfam
Location: 2396 - 3229 (-)
Type: pfam
Location: 2396 - 3229 (-)
Gene ID: HRGMv2_3810_148_6
Type: CAZyme
Location: 3229 - 4086 (-)
Type: CAZyme
Location: 3229 - 4086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.