Cluster: HRGMv2_3810_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3810
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3810_3 | HRGMv2_3810_3_10 | 8953 | 10356 | - | 2.A.25.1.5 |
| NULL(UNKNOWN) | HRGMv2_3810_3 | HRGMv2_3810_3_11 | 10444 | 11088 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3810_3 | HRGMv2_3810_3_12 | 11081 | 12136 | - | GT9 |
| CAZyme | HRGMv2_3810_3 | HRGMv2_3810_3_13 | 12136 | 13179 | - | GT9 |
Gene ID: HRGMv2_3810_3_10
Type: TC
Location: 8953 - 10356 (-)
Type: TC
Location: 8953 - 10356 (-)
Gene ID: HRGMv2_3810_3_11
Type:
Location: 10444 - 11088 (-)
Type:
Location: 10444 - 11088 (-)
Gene ID: HRGMv2_3810_3_12
Type: CAZyme
Location: 11081 - 12136 (-)
Type: CAZyme
Location: 11081 - 12136 (-)
Gene ID: HRGMv2_3810_3_13
Type: CAZyme
Location: 12136 - 13179 (-)
Type: CAZyme
Location: 12136 - 13179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.