Cluster: HRGMv2_3809_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3809
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3809_36 | HRGMv2_3809_36_29 | 26351 | 27457 | - | GT28 |
| pfam | HRGMv2_3809_36 | HRGMv2_3809_36_30 | 27457 | 28869 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3809_36 | HRGMv2_3809_36_31 | 28869 | 29858 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3809_36_29
Type: CAZyme
Location: 26351 - 27457 (-)
Type: CAZyme
Location: 26351 - 27457 (-)
Gene ID: HRGMv2_3809_36_30
Type: pfam
Location: 27457 - 28869 (-)
Type: pfam
Location: 27457 - 28869 (-)
Gene ID: HRGMv2_3809_36_31
Type: TC
Location: 28869 - 29858 (-)
Type: TC
Location: 28869 - 29858 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp937926555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.