Cluster: HRGMv2_3809_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3809
- CGC Family ID: CGCFAM_01051
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3809_21 | HRGMv2_3809_21_1 | 88 | 1332 | + | GH33 |
| TC | HRGMv2_3809_21 | HRGMv2_3809_21_2 | 1449 | 2405 | + | 2.A.80.1.3 |
| pfam | HRGMv2_3809_21 | HRGMv2_3809_21_3 | 2650 | 3120 | + | TctB |
| TC | HRGMv2_3809_21 | HRGMv2_3809_21_4 | 3132 | 4088 | + | 2.A.80.1.4 |
| TC | HRGMv2_3809_21 | HRGMv2_3809_21_5 | 4031 | 4603 | + | 2.A.80.1.1 |
Gene ID: HRGMv2_3809_21_1
Type: CAZyme
Location: 88 - 1332 (+)
Type: CAZyme
Location: 88 - 1332 (+)
Gene ID: HRGMv2_3809_21_2
Type: TC
Location: 1449 - 2405 (+)
Type: TC
Location: 1449 - 2405 (+)
Gene ID: HRGMv2_3809_21_3
Type: pfam
Location: 2650 - 3120 (+)
Type: pfam
Location: 2650 - 3120 (+)
Gene ID: HRGMv2_3809_21_4
Type: TC
Location: 3132 - 4088 (+)
Type: TC
Location: 3132 - 4088 (+)
Gene ID: HRGMv2_3809_21_5
Type: TC
Location: 4031 - 4603 (+)
Type: TC
Location: 4031 - 4603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp937926555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.