Cluster: HRGMv2_3809_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3809
- CGC Family ID: CGCFAM_03693
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3809_17 | HRGMv2_3809_17_8 | 10151 | 11551 | - | 2.A.25.1.4 |
| CAZyme | HRGMv2_3809_17 | HRGMv2_3809_17_9 | 12149 | 13285 | + | GT83 |
| NULL(UNKNOWN) | HRGMv2_3809_17 | HRGMv2_3809_17_10 | 13267 | 13752 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3809_17 | HRGMv2_3809_17_11 | 13945 | 16743 | - | 1.B.40.2.2 |
Gene ID: HRGMv2_3809_17_8
Type: TC
Location: 10151 - 11551 (-)
Type: TC
Location: 10151 - 11551 (-)
Gene ID: HRGMv2_3809_17_9
Type: CAZyme
Location: 12149 - 13285 (+)
Type: CAZyme
Location: 12149 - 13285 (+)
Gene ID: HRGMv2_3809_17_10
Type:
Location: 13267 - 13752 (+)
Type:
Location: 13267 - 13752 (+)
Gene ID: HRGMv2_3809_17_11
Type: TC
Location: 13945 - 16743 (-)
Type: TC
Location: 13945 - 16743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp937926555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.