Cluster: HRGMv2_3809_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3809
- CGC Family ID: CGCFAM_08686
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3809_91 | HRGMv2_3809_91_1 | 3 | 320 | + | 3.A.1.122.8 |
| pfam | HRGMv2_3809_91 | HRGMv2_3809_91_2 | 310 | 1197 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_3809_91 | HRGMv2_3809_91_3 | 1211 | 2344 | + | Peptidase_M23 |
| TC | HRGMv2_3809_91 | HRGMv2_3809_91_4 | 2360 | 3538 | + | 9.B.174.1.1 |
| pfam | HRGMv2_3809_91 | HRGMv2_3809_91_5 | 3747 | 4643 | - | Radical_SAM | Fer4_12 |
| pfam | HRGMv2_3809_91 | HRGMv2_3809_91_6 | 4989 | 6164 | + | AICARFT_IMPCHas |
| CAZyme | HRGMv2_3809_91 | HRGMv2_3809_91_7 | 6509 | 7582 | - | GT51 |
Gene ID: HRGMv2_3809_91_1
Type: TC
Location: 3 - 320 (+)
Type: TC
Location: 3 - 320 (+)
Gene ID: HRGMv2_3809_91_2
Type: pfam
Location: 310 - 1197 (+)
Type: pfam
Location: 310 - 1197 (+)
Gene ID: HRGMv2_3809_91_3
Type: STP
Location: 1211 - 2344 (+)
Type: STP
Location: 1211 - 2344 (+)
Gene ID: HRGMv2_3809_91_4
Type: TC
Location: 2360 - 3538 (+)
Type: TC
Location: 2360 - 3538 (+)
Gene ID: HRGMv2_3809_91_5
Type: pfam
Location: 3747 - 4643 (-)
Type: pfam
Location: 3747 - 4643 (-)
Gene ID: HRGMv2_3809_91_6
Type: pfam
Location: 4989 - 6164 (+)
Type: pfam
Location: 4989 - 6164 (+)
Gene ID: HRGMv2_3809_91_7
Type: CAZyme
Location: 6509 - 7582 (-)
Type: CAZyme
Location: 6509 - 7582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp937926555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.