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Cluster: HRGMv2_3809_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3809_67 HRGMv2_3809_67_20 22440 23828 + 2.A.40.7.6
STP HRGMv2_3809_67 HRGMv2_3809_67_21 23985 25565 + HD
pfam HRGMv2_3809_67 HRGMv2_3809_67_22 25599 26402 + Peptidase_C70 | Peptidase_C39_2
TC HRGMv2_3809_67 HRGMv2_3809_67_23 26737 27537 - 3.A.1.17.1
TC HRGMv2_3809_67 HRGMv2_3809_67_24 27530 28315 - 3.A.1.16.1
STP HRGMv2_3809_67 HRGMv2_3809_67_25 28424 29452 - SBP_bac_3
NULL(UNKNOWN) HRGMv2_3809_67 HRGMv2_3809_67_26 29857 32106 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3809_67 HRGMv2_3809_67_27 32537 33694 + 8.A.1.6.1
TC HRGMv2_3809_67 HRGMv2_3809_67_28 33706 36852 + 2.A.6.2.42
TC HRGMv2_3809_67 HRGMv2_3809_67_29 37076 38824 + 3.A.1.203.11
NULL(UNKNOWN) HRGMv2_3809_67 HRGMv2_3809_67_30 39145 39753 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3809_67 HRGMv2_3809_67_31 39791 42427 + 3.A.3.2.22
TC HRGMv2_3809_67 HRGMv2_3809_67_32 42660 43958 - 9.A.40.2.4
CAZyme HRGMv2_3809_67 HRGMv2_3809_67_33 44135 45400 - PL38
pfam HRGMv2_3809_67 HRGMv2_3809_67_34 45704 46048 + Trns_repr_metal
TC HRGMv2_3809_67 HRGMv2_3809_67_35 46129 47481 + 3.B.1.1.6
Gene ID: HRGMv2_3809_67_20
Type: TC
Location: 22440 - 23828 (+)
Gene ID: HRGMv2_3809_67_21
Type: STP
Location: 23985 - 25565 (+)
Gene ID: HRGMv2_3809_67_22
Type: pfam
Location: 25599 - 26402 (+)
Gene ID: HRGMv2_3809_67_23
Type: TC
Location: 26737 - 27537 (-)
Gene ID: HRGMv2_3809_67_24
Type: TC
Location: 27530 - 28315 (-)
Gene ID: HRGMv2_3809_67_25
Type: STP
Location: 28424 - 29452 (-)
Gene ID: HRGMv2_3809_67_26
Type:
Location: 29857 - 32106 (+)
Gene ID: HRGMv2_3809_67_27
Type: TC
Location: 32537 - 33694 (+)
Gene ID: HRGMv2_3809_67_28
Type: TC
Location: 33706 - 36852 (+)
Gene ID: HRGMv2_3809_67_29
Type: TC
Location: 37076 - 38824 (+)
Gene ID: HRGMv2_3809_67_30
Type:
Location: 39145 - 39753 (+)
Gene ID: HRGMv2_3809_67_31
Type: TC
Location: 39791 - 42427 (+)
Gene ID: HRGMv2_3809_67_32
Type: TC
Location: 42660 - 43958 (-)
Gene ID: HRGMv2_3809_67_33
Type: CAZyme
Location: 44135 - 45400 (-)
Gene ID: HRGMv2_3809_67_34
Type: pfam
Location: 45704 - 46048 (+)
Gene ID: HRGMv2_3809_67_35
Type: TC
Location: 46129 - 47481 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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