Cluster: HRGMv2_3808_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3808_115 | HRGMv2_3808_115_5 | 6256 | 7356 | + | GT28 |
| pfam | HRGMv2_3808_115 | HRGMv2_3808_115_6 | 7471 | 8601 | + | DNA_processg_A | DprA_WH |
| TC | HRGMv2_3808_115 | HRGMv2_3808_115_7 | 8614 | 10713 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_3808_115_5
Type: CAZyme
Location: 6256 - 7356 (+)
Type: CAZyme
Location: 6256 - 7356 (+)
Gene ID: HRGMv2_3808_115_6
Type: pfam
Location: 7471 - 8601 (+)
Type: pfam
Location: 7471 - 8601 (+)
Gene ID: HRGMv2_3808_115_7
Type: TC
Location: 8614 - 10713 (+)
Type: TC
Location: 8614 - 10713 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.