Cluster: HRGMv2_3808_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3808
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3808_113 | HRGMv2_3808_113_24 | 19415 | 19987 | - | GT28 |
| pfam | HRGMv2_3808_113 | HRGMv2_3808_113_25 | 20008 | 20517 | - | Glyco_transf_28 |
| pfam | HRGMv2_3808_113 | HRGMv2_3808_113_26 | 20535 | 21896 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3808_113 | HRGMv2_3808_113_27 | 21909 | 22757 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3808_113_24
Type: CAZyme
Location: 19415 - 19987 (-)
Type: CAZyme
Location: 19415 - 19987 (-)
Gene ID: HRGMv2_3808_113_25
Type: pfam
Location: 20008 - 20517 (-)
Type: pfam
Location: 20008 - 20517 (-)
Gene ID: HRGMv2_3808_113_26
Type: pfam
Location: 20535 - 21896 (-)
Type: pfam
Location: 20535 - 21896 (-)
Gene ID: HRGMv2_3808_113_27
Type: TC
Location: 21909 - 22757 (-)
Type: TC
Location: 21909 - 22757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.