Cluster: HRGMv2_3808_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3808_94 | HRGMv2_3808_94_19 | 15552 | 16553 | + | 4.D.2.1.4 |
| pfam | HRGMv2_3808_94 | HRGMv2_3808_94_20 | 16550 | 17497 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_3808_94 | HRGMv2_3808_94_21 | 17484 | 19004 | + | GT83 |
Gene ID: HRGMv2_3808_94_19
Type: TC
Location: 15552 - 16553 (+)
Type: TC
Location: 15552 - 16553 (+)
Gene ID: HRGMv2_3808_94_20
Type: pfam
Location: 16550 - 17497 (+)
Type: pfam
Location: 16550 - 17497 (+)
Gene ID: HRGMv2_3808_94_21
Type: CAZyme
Location: 17484 - 19004 (+)
Type: CAZyme
Location: 17484 - 19004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.