Cluster: HRGMv2_3808_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3808_46 | HRGMv2_3808_46_9 | 7083 | 7880 | + | 3.A.1.14.7 |
| pfam | HRGMv2_3808_46 | HRGMv2_3808_46_10 | 7880 | 9094 | + | SUFBD_core |
| pfam | HRGMv2_3808_46 | HRGMv2_3808_46_11 | 9479 | 9997 | + | MatE |
| TC | HRGMv2_3808_46 | HRGMv2_3808_46_12 | 9966 | 10826 | + | 2.A.66.1.23 |
| pfam | HRGMv2_3808_46 | HRGMv2_3808_46_13 | 10900 | 12345 | + | PGI |
| CAZyme | HRGMv2_3808_46 | HRGMv2_3808_46_14 | 12379 | 12987 | - | GT51 |
Gene ID: HRGMv2_3808_46_9
Type: TC
Location: 7083 - 7880 (+)
Type: TC
Location: 7083 - 7880 (+)
Gene ID: HRGMv2_3808_46_10
Type: pfam
Location: 7880 - 9094 (+)
Type: pfam
Location: 7880 - 9094 (+)
Gene ID: HRGMv2_3808_46_11
Type: pfam
Location: 9479 - 9997 (+)
Type: pfam
Location: 9479 - 9997 (+)
Gene ID: HRGMv2_3808_46_12
Type: TC
Location: 9966 - 10826 (+)
Type: TC
Location: 9966 - 10826 (+)
Gene ID: HRGMv2_3808_46_13
Type: pfam
Location: 10900 - 12345 (+)
Type: pfam
Location: 10900 - 12345 (+)
Gene ID: HRGMv2_3808_46_14
Type: CAZyme
Location: 12379 - 12987 (-)
Type: CAZyme
Location: 12379 - 12987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.