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Cluster: HRGMv2_3806_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3806_10 HRGMv2_3806_10_3 2219 3640 + 2.A.118.1.3
peptidase HRGMv2_3806_10 HRGMv2_3806_10_4 3680 4873 + M20.UPD
TF HRGMv2_3806_10 HRGMv2_3806_10_5 5071 6480 + 0043095
TC HRGMv2_3806_10 HRGMv2_3806_10_6 6609 8033 + 9.B.18.1.2
CAZyme HRGMv2_3806_10 HRGMv2_3806_10_7 8038 8847 + GT111
TC HRGMv2_3806_10 HRGMv2_3806_10_8 8970 9740 + 3.A.1.103.1
TC HRGMv2_3806_10 HRGMv2_3806_10_9 9750 10478 + 3.A.1.103.1
CAZyme HRGMv2_3806_10 HRGMv2_3806_10_10 10498 12435 + GT111 | GT8
CAZyme HRGMv2_3806_10 HRGMv2_3806_10_11 12457 13434 + GT111
Gene ID: HRGMv2_3806_10_3
Type: TC
Location: 2219 - 3640 (+)
Gene ID: HRGMv2_3806_10_4
Type: peptidase
Location: 3680 - 4873 (+)
Gene ID: HRGMv2_3806_10_5
Type: TF
Location: 5071 - 6480 (+)
Gene ID: HRGMv2_3806_10_6
Type: TC
Location: 6609 - 8033 (+)
Gene ID: HRGMv2_3806_10_7
Type: CAZyme
Location: 8038 - 8847 (+)
Gene ID: HRGMv2_3806_10_8
Type: TC
Location: 8970 - 9740 (+)
Gene ID: HRGMv2_3806_10_9
Type: TC
Location: 9750 - 10478 (+)
Gene ID: HRGMv2_3806_10_10
Type: CAZyme
Location: 10498 - 12435 (+)
Gene ID: HRGMv2_3806_10_11
Type: CAZyme
Location: 12457 - 13434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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