Cluster: HRGMv2_3800_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3800
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3800_21 | HRGMv2_3800_21_6 | 7809 | 9638 | - | 9.B.174.1.1 |
| NULL(UNKNOWN) | HRGMv2_3800_21 | HRGMv2_3800_21_7 | 9694 | 9897 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3800_21 | HRGMv2_3800_21_8 | 10054 | 10965 | + | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| CAZyme | HRGMv2_3800_21 | HRGMv2_3800_21_9 | 11358 | 12143 | + | GH23 |
| pfam | HRGMv2_3800_21 | HRGMv2_3800_21_10 | 12240 | 12767 | + | Ribosomal_S30AE | Ribosom_S30AE_C |
| pfam | HRGMv2_3800_21 | HRGMv2_3800_21_11 | 12863 | 13702 | - | TP_methylase |
| CAZyme | HRGMv2_3800_21 | HRGMv2_3800_21_12 | 13706 | 14950 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3800_21 | HRGMv2_3800_21_13 | 15163 | 15558 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3800_21 | HRGMv2_3800_21_14 | 15617 | 17236 | + | 1.B.5.2.2 |
| TC | HRGMv2_3800_21 | HRGMv2_3800_21_15 | 17257 | 18192 | + | 3.A.1.15.16 |
| TC | HRGMv2_3800_21 | HRGMv2_3800_21_16 | 18189 | 18938 | + | 3.A.1.15.8 |
| TC | HRGMv2_3800_21 | HRGMv2_3800_21_17 | 18964 | 19770 | + | 3.A.1.15.2 |
Gene ID: HRGMv2_3800_21_6
Type: TC
Location: 7809 - 9638 (-)
Type: TC
Location: 7809 - 9638 (-)
Gene ID: HRGMv2_3800_21_7
Type:
Location: 9694 - 9897 (-)
Type:
Location: 9694 - 9897 (-)
Gene ID: HRGMv2_3800_21_8
Type: pfam
Location: 10054 - 10965 (+)
Type: pfam
Location: 10054 - 10965 (+)
Gene ID: HRGMv2_3800_21_9
Type: CAZyme
Location: 11358 - 12143 (+)
Type: CAZyme
Location: 11358 - 12143 (+)
Gene ID: HRGMv2_3800_21_10
Type: pfam
Location: 12240 - 12767 (+)
Type: pfam
Location: 12240 - 12767 (+)
Gene ID: HRGMv2_3800_21_11
Type: pfam
Location: 12863 - 13702 (-)
Type: pfam
Location: 12863 - 13702 (-)
Gene ID: HRGMv2_3800_21_12
Type: CAZyme
Location: 13706 - 14950 (-)
Type: CAZyme
Location: 13706 - 14950 (-)
Gene ID: HRGMv2_3800_21_13
Type:
Location: 15163 - 15558 (+)
Type:
Location: 15163 - 15558 (+)
Gene ID: HRGMv2_3800_21_14
Type: TC
Location: 15617 - 17236 (+)
Type: TC
Location: 15617 - 17236 (+)
Gene ID: HRGMv2_3800_21_15
Type: TC
Location: 17257 - 18192 (+)
Type: TC
Location: 17257 - 18192 (+)
Gene ID: HRGMv2_3800_21_16
Type: TC
Location: 18189 - 18938 (+)
Type: TC
Location: 18189 - 18938 (+)
Gene ID: HRGMv2_3800_21_17
Type: TC
Location: 18964 - 19770 (+)
Type: TC
Location: 18964 - 19770 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Eremiobacterota
Class
Xenobia
Order
Xenobiales
Family
Xenobiaceae
Genus
Bruticola
Species
Bruticola sp944322965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.