dbCAN Logo

Cluster: HRGMv2_3800_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3800_15 HRGMv2_3800_15_16 17141 19300 - CBM48 | GH13_11
pfam HRGMv2_3800_15 HRGMv2_3800_15_17 19332 20366 - YchF-GTPase_C
NULL(UNKNOWN) HRGMv2_3800_15 HRGMv2_3800_15_18 20483 21697 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3800_15 HRGMv2_3800_15_19 21773 22552 + 3.A.1.27.2
TC HRGMv2_3800_15 HRGMv2_3800_15_20 22628 23389 + 3.A.1.27.3
pfam HRGMv2_3800_15 HRGMv2_3800_15_21 23435 24910 + MlaD
STP HRGMv2_3800_15 HRGMv2_3800_15_22 25050 26240 + Pkinase
TC HRGMv2_3800_15 HRGMv2_3800_15_23 26306 27289 + 9.B.146.1.1
Gene ID: HRGMv2_3800_15_16
Type: CAZyme
Location: 17141 - 19300 (-)
Gene ID: HRGMv2_3800_15_17
Type: pfam
Location: 19332 - 20366 (-)
Gene ID: HRGMv2_3800_15_18
Type:
Location: 20483 - 21697 (+)
Gene ID: HRGMv2_3800_15_19
Type: TC
Location: 21773 - 22552 (+)
Gene ID: HRGMv2_3800_15_20
Type: TC
Location: 22628 - 23389 (+)
Gene ID: HRGMv2_3800_15_21
Type: pfam
Location: 23435 - 24910 (+)
Gene ID: HRGMv2_3800_15_22
Type: STP
Location: 25050 - 26240 (+)
Gene ID: HRGMv2_3800_15_23
Type: TC
Location: 26306 - 27289 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Eremiobacterota
→
Class
Xenobia
→
Order
Xenobiales
→
Family
Xenobiaceae
→
Genus
Bruticola
→
Species
Bruticola sp944322965

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List