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Cluster: HRGMv2_3799_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3799_1 HRGMv2_3799_1_54 76758 77417 + 9.B.18.1.2
STP HRGMv2_3799_1 HRGMv2_3799_1_55 77489 78655 + Aminotran_1_2
TC HRGMv2_3799_1 HRGMv2_3799_1_56 78668 80476 + 9.B.18.2.1
STP HRGMv2_3799_1 HRGMv2_3799_1_57 80487 82784 - HATPase_c | HisKA | dCache_1
TC HRGMv2_3799_1 HRGMv2_3799_1_58 82888 84144 + 9.B.106.2.2
CAZyme HRGMv2_3799_1 HRGMv2_3799_1_59 84249 85448 - GT4
Gene ID: HRGMv2_3799_1_54
Type: TC
Location: 76758 - 77417 (+)
Gene ID: HRGMv2_3799_1_55
Type: STP
Location: 77489 - 78655 (+)
Gene ID: HRGMv2_3799_1_56
Type: TC
Location: 78668 - 80476 (+)
Gene ID: HRGMv2_3799_1_57
Type: STP
Location: 80487 - 82784 (-)
Gene ID: HRGMv2_3799_1_58
Type: TC
Location: 82888 - 84144 (+)
Gene ID: HRGMv2_3799_1_59
Type: CAZyme
Location: 84249 - 85448 (-)

Taxonomic Lineage

Domain
Bacteria
Class
Xenobia

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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