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Cluster: HRGMv2_3789_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3789_2 HRGMv2_3789_2_112 133727 136684 + 1.B.14.6.11
NULL(UNKNOWN) HRGMv2_3789_2 HRGMv2_3789_2_113 136904 137749 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3789_2 HRGMv2_3789_2_114 137866 138759 - HSP33
CAZyme HRGMv2_3789_2 HRGMv2_3789_2_115 138837 139586 + GT51
CAZyme HRGMv2_3789_2 HRGMv2_3789_2_116 139633 140652 + GT2
STP HRGMv2_3789_2 HRGMv2_3789_2_117 140612 141043 + CBS | CBS
pfam HRGMv2_3789_2 HRGMv2_3789_2_118 141513 143486 - AsmA | AsmA
TC HRGMv2_3789_2 HRGMv2_3789_2_119 143570 144208 - 1.C.113.1.1
Gene ID: HRGMv2_3789_2_112
Type: TC
Location: 133727 - 136684 (+)
Gene ID: HRGMv2_3789_2_113
Type:
Location: 136904 - 137749 (-)
Gene ID: HRGMv2_3789_2_114
Type: pfam
Location: 137866 - 138759 (-)
Gene ID: HRGMv2_3789_2_115
Type: CAZyme
Location: 138837 - 139586 (+)
Gene ID: HRGMv2_3789_2_116
Type: CAZyme
Location: 139633 - 140652 (+)
Gene ID: HRGMv2_3789_2_117
Type: STP
Location: 140612 - 141043 (+)
Gene ID: HRGMv2_3789_2_118
Type: pfam
Location: 141513 - 143486 (-)
Gene ID: HRGMv2_3789_2_119
Type: TC
Location: 143570 - 144208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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