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Cluster: HRGMv2_3789_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3789_20 HRGMv2_3789_20_73 80989 84018 - 1.B.12.5.7
pfam HRGMv2_3789_20 HRGMv2_3789_20_74 84318 85385 - HGSNAT_cat
CAZyme HRGMv2_3789_20 HRGMv2_3789_20_75 85385 86533 - CE9
STP HRGMv2_3789_20 HRGMv2_3789_20_76 86533 87561 - SIS | SIS
TF HRGMv2_3789_20 HRGMv2_3789_20_77 87569 88636 - LacI
TC HRGMv2_3789_20 HRGMv2_3789_20_78 88676 89965 - 2.A.1.7.9
STP HRGMv2_3789_20 HRGMv2_3789_20_79 90344 91363 + Glucokinase
TC HRGMv2_3789_20 HRGMv2_3789_20_80 91507 94215 + 1.B.14.12.2
CAZyme HRGMv2_3789_20 HRGMv2_3789_20_81 94327 96684 + GH20
Gene ID: HRGMv2_3789_20_73
Type: TC
Location: 80989 - 84018 (-)
Gene ID: HRGMv2_3789_20_74
Type: pfam
Location: 84318 - 85385 (-)
Gene ID: HRGMv2_3789_20_75
Type: CAZyme
Location: 85385 - 86533 (-)
Gene ID: HRGMv2_3789_20_76
Type: STP
Location: 86533 - 87561 (-)
Gene ID: HRGMv2_3789_20_77
Type: TF
Location: 87569 - 88636 (-)
Gene ID: HRGMv2_3789_20_78
Type: TC
Location: 88676 - 89965 (-)
Gene ID: HRGMv2_3789_20_79
Type: STP
Location: 90344 - 91363 (+)
Gene ID: HRGMv2_3789_20_80
Type: TC
Location: 91507 - 94215 (+)
Gene ID: HRGMv2_3789_20_81
Type: CAZyme
Location: 94327 - 96684 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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