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Cluster: HRGMv2_3789_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3789_20 HRGMv2_3789_20_56 60649 61494 - 2.A.7.3.6
TF HRGMv2_3789_20 HRGMv2_3789_20_57 61591 62073 + HTH_11
STP HRGMv2_3789_20 HRGMv2_3789_20_58 62083 62634 + Peptidase_M23
TC HRGMv2_3789_20 HRGMv2_3789_20_59 62806 64965 + 1.B.14.1.1
NULL(UNKNOWN) HRGMv2_3789_20 HRGMv2_3789_20_60 65106 66287 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3789_20 HRGMv2_3789_20_61 66413 69274 - 1.B.14.3.1
NULL(UNKNOWN) HRGMv2_3789_20 HRGMv2_3789_20_62 70033 70791 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3789_20 HRGMv2_3789_20_63 70848 71255 - 1.A.30.2.7
CAZyme HRGMv2_3789_20 HRGMv2_3789_20_64 71406 73391 + GH23
Gene ID: HRGMv2_3789_20_56
Type: TC
Location: 60649 - 61494 (-)
Gene ID: HRGMv2_3789_20_57
Type: TF
Location: 61591 - 62073 (+)
Gene ID: HRGMv2_3789_20_58
Type: STP
Location: 62083 - 62634 (+)
Gene ID: HRGMv2_3789_20_59
Type: TC
Location: 62806 - 64965 (+)
Gene ID: HRGMv2_3789_20_60
Type:
Location: 65106 - 66287 (-)
Gene ID: HRGMv2_3789_20_61
Type: TC
Location: 66413 - 69274 (-)
Gene ID: HRGMv2_3789_20_62
Type:
Location: 70033 - 70791 (+)
Gene ID: HRGMv2_3789_20_63
Type: TC
Location: 70848 - 71255 (-)
Gene ID: HRGMv2_3789_20_64
Type: CAZyme
Location: 71406 - 73391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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