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Cluster: HRGMv2_3789_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3789_9 HRGMv2_3789_9_11 16470 18020 - 2.A.15.1.3
STP HRGMv2_3789_9 HRGMv2_3789_9_12 18191 18781 + TetR_N
sulfatase HRGMv2_3789_9 HRGMv2_3789_9_13 18820 20292 + S1_6
CAZyme HRGMv2_3789_9 HRGMv2_3789_9_14 20394 22076 + AA3_2
TC HRGMv2_3789_9 HRGMv2_3789_9_15 22303 23979 + 4.C.1.1.4
pfam HRGMv2_3789_9 HRGMv2_3789_9_16 24141 25013 + ECH_1 | ECH_2
STP HRGMv2_3789_9 HRGMv2_3789_9_17 25088 27265 - HATPase_c | HisKA | Response_reg
TC HRGMv2_3789_9 HRGMv2_3789_9_18 27262 28407 - 8.A.59.4.2
Gene ID: HRGMv2_3789_9_11
Type: TC
Location: 16470 - 18020 (-)
Gene ID: HRGMv2_3789_9_12
Type: STP
Location: 18191 - 18781 (+)
Gene ID: HRGMv2_3789_9_13
Type: sulfatase
Location: 18820 - 20292 (+)
Gene ID: HRGMv2_3789_9_14
Type: CAZyme
Location: 20394 - 22076 (+)
Gene ID: HRGMv2_3789_9_15
Type: TC
Location: 22303 - 23979 (+)
Gene ID: HRGMv2_3789_9_16
Type: pfam
Location: 24141 - 25013 (+)
Gene ID: HRGMv2_3789_9_17
Type: STP
Location: 25088 - 27265 (-)
Gene ID: HRGMv2_3789_9_18
Type: TC
Location: 27262 - 28407 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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