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Cluster: HRGMv2_3789_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3789_7 HRGMv2_3789_7_97 105559 106392 + 3.A.1.16.2
TC HRGMv2_3789_7 HRGMv2_3789_7_98 106376 107152 + 3.A.1.17.7
pfam HRGMv2_3789_7 HRGMv2_3789_7_99 107287 108726 + Porin_O_P
pfam HRGMv2_3789_7 HRGMv2_3789_7_100 108752 110029 - Na_sulph_symp | ArsB | CitMHS | MatC_N
CAZyme HRGMv2_3789_7 HRGMv2_3789_7_101 110192 112768 - GH3
TF HRGMv2_3789_7 HRGMv2_3789_7_102 112985 114031 + LacI
TC HRGMv2_3789_7 HRGMv2_3789_7_103 114098 115558 - 2.A.1.7.11
TC HRGMv2_3789_7 HRGMv2_3789_7_104 115673 118339 - 1.B.14.8.1
Gene ID: HRGMv2_3789_7_97
Type: TC
Location: 105559 - 106392 (+)
Gene ID: HRGMv2_3789_7_98
Type: TC
Location: 106376 - 107152 (+)
Gene ID: HRGMv2_3789_7_99
Type: pfam
Location: 107287 - 108726 (+)
Gene ID: HRGMv2_3789_7_100
Type: pfam
Location: 108752 - 110029 (-)
Gene ID: HRGMv2_3789_7_101
Type: CAZyme
Location: 110192 - 112768 (-)
Gene ID: HRGMv2_3789_7_102
Type: TF
Location: 112985 - 114031 (+)
Gene ID: HRGMv2_3789_7_103
Type: TC
Location: 114098 - 115558 (-)
Gene ID: HRGMv2_3789_7_104
Type: TC
Location: 115673 - 118339 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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