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Cluster: HRGMv2_3786_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3786_8 HRGMv2_3786_8_10 10396 11388 - GT2
pfam HRGMv2_3786_8 HRGMv2_3786_8_11 11385 12386 - IPPT | IPT
CAZyme HRGMv2_3786_8 HRGMv2_3786_8_12 12489 13340 + CE11
pfam HRGMv2_3786_8 HRGMv2_3786_8_13 13464 14381 + FabA | FabA
TC HRGMv2_3786_8 HRGMv2_3786_8_14 14510 16744 + 3.A.11.3.1
pfam HRGMv2_3786_8 HRGMv2_3786_8_15 16804 18078 + SLFN_AlbA_2
TC HRGMv2_3786_8 HRGMv2_3786_8_16 18122 19099 - 3.A.1.5.35
TC HRGMv2_3786_8 HRGMv2_3786_8_17 19112 20212 - 9.B.146.1.1
Gene ID: HRGMv2_3786_8_10
Type: CAZyme
Location: 10396 - 11388 (-)
Gene ID: HRGMv2_3786_8_11
Type: pfam
Location: 11385 - 12386 (-)
Gene ID: HRGMv2_3786_8_12
Type: CAZyme
Location: 12489 - 13340 (+)
Gene ID: HRGMv2_3786_8_13
Type: pfam
Location: 13464 - 14381 (+)
Gene ID: HRGMv2_3786_8_14
Type: TC
Location: 14510 - 16744 (+)
Gene ID: HRGMv2_3786_8_15
Type: pfam
Location: 16804 - 18078 (+)
Gene ID: HRGMv2_3786_8_16
Type: TC
Location: 18122 - 19099 (-)
Gene ID: HRGMv2_3786_8_17
Type: TC
Location: 19112 - 20212 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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