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Cluster: HRGMv2_3786_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3786_98 HRGMv2_3786_98_1 160 1626 + 2.A.66.1.12
NULL(UNKNOWN) HRGMv2_3786_98 HRGMv2_3786_98_2 1783 2361 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3786_98 HRGMv2_3786_98_3 2390 3139 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3786_98 HRGMv2_3786_98_4 3119 3772 - 2.A.53.3.8
pfam HRGMv2_3786_98 HRGMv2_3786_98_5 3802 4869 - LPG_synthase_TM
CAZyme HRGMv2_3786_98 HRGMv2_3786_98_6 4869 6383 - GT83
CAZyme HRGMv2_3786_98 HRGMv2_3786_98_7 6510 7988 - GH20
Gene ID: HRGMv2_3786_98_1
Type: TC
Location: 160 - 1626 (+)
Gene ID: HRGMv2_3786_98_2
Type:
Location: 1783 - 2361 (+)
Gene ID: HRGMv2_3786_98_3
Type:
Location: 2390 - 3139 (+)
Gene ID: HRGMv2_3786_98_4
Type: TC
Location: 3119 - 3772 (-)
Gene ID: HRGMv2_3786_98_5
Type: pfam
Location: 3802 - 4869 (-)
Gene ID: HRGMv2_3786_98_6
Type: CAZyme
Location: 4869 - 6383 (-)
Gene ID: HRGMv2_3786_98_7
Type: CAZyme
Location: 6510 - 7988 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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