Cluster: HRGMv2_3786_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3786
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3786_2 | HRGMv2_3786_2_1 | 349 | 1566 | + | CE9 |
| pfam | HRGMv2_3786_2 | HRGMv2_3786_2_2 | 1666 | 2535 | + | Methyltrans_SAM |
| TC | HRGMv2_3786_2 | HRGMv2_3786_2_3 | 2588 | 4171 | + | 2.A.66.4.3 |
| NULL(UNKNOWN) | HRGMv2_3786_2 | HRGMv2_3786_2_4 | 4365 | 4772 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3786_2 | HRGMv2_3786_2_5 | 4890 | 7130 | + | HATPase_c | HisKA | Response_reg |
| TC | HRGMv2_3786_2 | HRGMv2_3786_2_6 | 7323 | 8162 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_3786_2_1
Type: CAZyme
Location: 349 - 1566 (+)
Type: CAZyme
Location: 349 - 1566 (+)
Gene ID: HRGMv2_3786_2_2
Type: pfam
Location: 1666 - 2535 (+)
Type: pfam
Location: 1666 - 2535 (+)
Gene ID: HRGMv2_3786_2_3
Type: TC
Location: 2588 - 4171 (+)
Type: TC
Location: 2588 - 4171 (+)
Gene ID: HRGMv2_3786_2_4
Type:
Location: 4365 - 4772 (+)
Type:
Location: 4365 - 4772 (+)
Gene ID: HRGMv2_3786_2_5
Type: STP
Location: 4890 - 7130 (+)
Type: STP
Location: 4890 - 7130 (+)
Gene ID: HRGMv2_3786_2_6
Type: TC
Location: 7323 - 8162 (-)
Type: TC
Location: 7323 - 8162 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CAAGED01
Species
CAAGED01 sp900768505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.