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Cluster: HRGMv2_3783_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3783_31 HRGMv2_3783_31_16 15536 17890 + 2.A.16.2.2
peptidase HRGMv2_3783_31 HRGMv2_3783_31_17 17920 18975 + M20.UPW
CAZyme HRGMv2_3783_31 HRGMv2_3783_31_18 19105 20391 + GT30
pfam HRGMv2_3783_31 HRGMv2_3783_31_19 20400 21686 + ThiC_Rad_SAM
pfam HRGMv2_3783_31 HRGMv2_3783_31_20 21683 22171 + dCMP_cyt_deam_1 | MafB19-deam
TC HRGMv2_3783_31 HRGMv2_3783_31_21 22185 23429 + 9.B.174.1.1
peptidase HRGMv2_3783_31 HRGMv2_3783_31_22 23473 24348 + S54.UPW
CAZyme HRGMv2_3783_31 HRGMv2_3783_31_23 24365 25834 + GT5
Gene ID: HRGMv2_3783_31_16
Type: TC
Location: 15536 - 17890 (+)
Gene ID: HRGMv2_3783_31_17
Type: peptidase
Location: 17920 - 18975 (+)
Gene ID: HRGMv2_3783_31_18
Type: CAZyme
Location: 19105 - 20391 (+)
Gene ID: HRGMv2_3783_31_19
Type: pfam
Location: 20400 - 21686 (+)
Gene ID: HRGMv2_3783_31_20
Type: pfam
Location: 21683 - 22171 (+)
Gene ID: HRGMv2_3783_31_21
Type: TC
Location: 22185 - 23429 (+)
Gene ID: HRGMv2_3783_31_22
Type: peptidase
Location: 23473 - 24348 (+)
Gene ID: HRGMv2_3783_31_23
Type: CAZyme
Location: 24365 - 25834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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