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Cluster: HRGMv2_3783_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3783_26 HRGMv2_3783_26_3 1380 1832 + CBM32
CAZyme HRGMv2_3783_26 HRGMv2_3783_26_4 1829 2281 + CBM32
CAZyme HRGMv2_3783_26 HRGMv2_3783_26_5 2331 2777 + CBM32
TC HRGMv2_3783_26 HRGMv2_3783_26_6 2840 3676 + 3.A.15.1.1
STP HRGMv2_3783_26 HRGMv2_3783_26_7 3790 3963 + Fer4 | Fer4
NULL(UNKNOWN) HRGMv2_3783_26 HRGMv2_3783_26_8 4100 5410 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3783_26 HRGMv2_3783_26_9 5527 7215 - 3.A.1.106.15
pfam HRGMv2_3783_26 HRGMv2_3783_26_10 7217 8188 - Radical_SAM | Fer4_12
pfam HRGMv2_3783_26 HRGMv2_3783_26_11 8279 9868 - PGI
CAZyme HRGMv2_3783_26 HRGMv2_3783_26_12 10047 13217 - GH148 | GH148
Gene ID: HRGMv2_3783_26_3
Type: CAZyme
Location: 1380 - 1832 (+)
Gene ID: HRGMv2_3783_26_4
Type: CAZyme
Location: 1829 - 2281 (+)
Gene ID: HRGMv2_3783_26_5
Type: CAZyme
Location: 2331 - 2777 (+)
Gene ID: HRGMv2_3783_26_6
Type: TC
Location: 2840 - 3676 (+)
Gene ID: HRGMv2_3783_26_7
Type: STP
Location: 3790 - 3963 (+)
Gene ID: HRGMv2_3783_26_8
Type:
Location: 4100 - 5410 (-)
Gene ID: HRGMv2_3783_26_9
Type: TC
Location: 5527 - 7215 (-)
Gene ID: HRGMv2_3783_26_10
Type: pfam
Location: 7217 - 8188 (-)
Gene ID: HRGMv2_3783_26_11
Type: pfam
Location: 8279 - 9868 (-)
Gene ID: HRGMv2_3783_26_12
Type: CAZyme
Location: 10047 - 13217 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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