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Cluster: HRGMv2_3783_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3783_24 HRGMv2_3783_24_27 44342 45844 + 3.A.1.120.3
pfam HRGMv2_3783_24 HRGMv2_3783_24_28 45851 46300 - C_GCAxxG_C_C
TF HRGMv2_3783_24 HRGMv2_3783_24_29 46437 47393 + LacI
CAZyme HRGMv2_3783_24 HRGMv2_3783_24_30 47397 50672 - GH148
TF HRGMv2_3783_24 HRGMv2_3783_24_31 51134 52201 - LacI
NULL(UNKNOWN) HRGMv2_3783_24 HRGMv2_3783_24_32 52276 53007 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3783_24 HRGMv2_3783_24_33 53074 56304 - GH148
TC HRGMv2_3783_24 HRGMv2_3783_24_34 56649 57665 + 3.A.1.7.1
TC HRGMv2_3783_24 HRGMv2_3783_24_35 57674 58651 + 3.A.1.7.1
TC HRGMv2_3783_24 HRGMv2_3783_24_36 58648 59517 + 3.A.1.7.1
TC HRGMv2_3783_24 HRGMv2_3783_24_37 59514 60290 + 3.A.1.7.1
Gene ID: HRGMv2_3783_24_27
Type: TC
Location: 44342 - 45844 (+)
Gene ID: HRGMv2_3783_24_28
Type: pfam
Location: 45851 - 46300 (-)
Gene ID: HRGMv2_3783_24_29
Type: TF
Location: 46437 - 47393 (+)
Gene ID: HRGMv2_3783_24_30
Type: CAZyme
Location: 47397 - 50672 (-)
Gene ID: HRGMv2_3783_24_31
Type: TF
Location: 51134 - 52201 (-)
Gene ID: HRGMv2_3783_24_32
Type:
Location: 52276 - 53007 (-)
Gene ID: HRGMv2_3783_24_33
Type: CAZyme
Location: 53074 - 56304 (-)
Gene ID: HRGMv2_3783_24_34
Type: TC
Location: 56649 - 57665 (+)
Gene ID: HRGMv2_3783_24_35
Type: TC
Location: 57674 - 58651 (+)
Gene ID: HRGMv2_3783_24_36
Type: TC
Location: 58648 - 59517 (+)
Gene ID: HRGMv2_3783_24_37
Type: TC
Location: 59514 - 60290 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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