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Cluster: HRGMv2_3783_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3783_16 HRGMv2_3783_16_53 54844 55965 + GH179
peptidase HRGMv2_3783_16 HRGMv2_3783_16_54 56057 58243 + U32.UPW
CAZyme HRGMv2_3783_16 HRGMv2_3783_16_55 58286 59770 + GH32
CAZyme HRGMv2_3783_16 HRGMv2_3783_16_56 59793 61562 - GH36
pfam HRGMv2_3783_16 HRGMv2_3783_16_57 61559 62617 - Radical_SAM
pfam HRGMv2_3783_16 HRGMv2_3783_16_58 62617 63684 - NAD_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
TC HRGMv2_3783_16 HRGMv2_3783_16_59 63851 65098 + 1.A.23.4.5
pfam HRGMv2_3783_16 HRGMv2_3783_16_60 65103 66059 + PTE
TC HRGMv2_3783_16 HRGMv2_3783_16_61 66068 68026 - 3.A.1.120.6
Gene ID: HRGMv2_3783_16_53
Type: CAZyme
Location: 54844 - 55965 (+)
Gene ID: HRGMv2_3783_16_54
Type: peptidase
Location: 56057 - 58243 (+)
Gene ID: HRGMv2_3783_16_55
Type: CAZyme
Location: 58286 - 59770 (+)
Gene ID: HRGMv2_3783_16_56
Type: CAZyme
Location: 59793 - 61562 (-)
Gene ID: HRGMv2_3783_16_57
Type: pfam
Location: 61559 - 62617 (-)
Gene ID: HRGMv2_3783_16_58
Type: pfam
Location: 62617 - 63684 (-)
Gene ID: HRGMv2_3783_16_59
Type: TC
Location: 63851 - 65098 (+)
Gene ID: HRGMv2_3783_16_60
Type: pfam
Location: 65103 - 66059 (+)
Gene ID: HRGMv2_3783_16_61
Type: TC
Location: 66068 - 68026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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