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Cluster: HRGMv2_3783_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3783_14 HRGMv2_3783_14_23 31947 33266 + GH109
pfam HRGMv2_3783_14 HRGMv2_3783_14_24 33295 34749 + Mannitol_dh | Mannitol_dh_C
pfam HRGMv2_3783_14 HRGMv2_3783_14_25 34762 36198 + GD_AH_second | GD_AH_C
CAZyme HRGMv2_3783_14 HRGMv2_3783_14_26 36347 37675 - GH10
TF HRGMv2_3783_14 HRGMv2_3783_14_27 37791 38750 + 0035607 | 0036286
CAZyme HRGMv2_3783_14 HRGMv2_3783_14_28 38671 40251 - GH78
TC HRGMv2_3783_14 HRGMv2_3783_14_29 40401 41681 + 2.A.103.1.3
CAZyme HRGMv2_3783_14 HRGMv2_3783_14_30 41682 42818 + GT28
Gene ID: HRGMv2_3783_14_23
Type: CAZyme
Location: 31947 - 33266 (+)
Gene ID: HRGMv2_3783_14_24
Type: pfam
Location: 33295 - 34749 (+)
Gene ID: HRGMv2_3783_14_25
Type: pfam
Location: 34762 - 36198 (+)
Gene ID: HRGMv2_3783_14_26
Type: CAZyme
Location: 36347 - 37675 (-)
Gene ID: HRGMv2_3783_14_27
Type: TF
Location: 37791 - 38750 (+)
Gene ID: HRGMv2_3783_14_28
Type: CAZyme
Location: 38671 - 40251 (-)
Gene ID: HRGMv2_3783_14_29
Type: TC
Location: 40401 - 41681 (+)
Gene ID: HRGMv2_3783_14_30
Type: CAZyme
Location: 41682 - 42818 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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